STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Elen_2146PFAM: lipolytic protein G-D-S-L family; KEGG: afw:Anae109_1651 GDSL family lipase. (294 aa)    
Predicted Functional Partners:
Elen_1817
PFAM: coagulation factor 5/8 type domain protein; Fibronectin type III domain protein; SMART: Fibronectin type III domain protein; KEGG: glo:Glov_0642 fibronectin type III domain protein.
  
 
 0.815
Elen_2637
TIGRFAM: phage tail component; KEGG: bha:BH3517 hypothetical protein.
  
   0.577
Elen_2145
PFAM: extracellular solute-binding protein family 5; KEGG: hdu:HD1669 putative ABC transporter periplasmic binding protein.
     
 0.569
Elen_2148
Oligopeptide/dipeptide ABC transporter, ATPase subunit; KEGG: hap:HAPS_1116 ABC-type oligopeptide transport systems, ATP-binding/permease; TIGRFAM: oligopeptide/dipeptide ABC transporter, ATPase subunit; PFAM: ABC transporter related; binding-protein- dependent transport systems inner membrane component; Oligopeptide/dipeptide ABC transporter domain protein; SMART: AAA ATPase; Belongs to the binding-protein-dependent transport system permease family.
     
 0.478
Elen_2149
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: hsm:HSM_0785 ABC transporter related.
     
 0.461
Elen_2147
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: apj:APJL_0860 ABC transporter, permease protein.
       0.449
Your Current Organism:
Eggerthella lenta
NCBI taxonomy Id: 479437
Other names: E. lenta DSM 2243, Eggerthella lenta DSM 2243, Eggerthella lenta str. DSM 2243, Eggerthella lenta strain DSM 2243
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