STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Elen_2406PFAM: band 7 protein; SMART: band 7 protein; KEGG: sus:Acid_1595 SPFH domain-containing protein/band 7 family protein. (333 aa)    
Predicted Functional Partners:
Elen_2407
Transcriptional regulator, GntR family; PFAM: regulatory protein GntR HTH; SMART: regulatory protein GntR HTH; KEGG: bcz:BCZK3976 GntR family transcriptional regulator.
  
    0.790
Elen_2408
PFAM: Polysulphide reductase NrfD; KEGG: acr:Acry_0343 polysulphide reductase, NrfD.
       0.776
ftsH
ATP-dependent metalloprotease FtsH; Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins; Belongs to the AAA ATPase family. In the central section; belongs to the AAA ATPase family.
  
 0.762
Elen_0747
PFAM: AAA ATPase central domain protein; ATPase associated with various cellular activities AAA_5; SMART: AAA ATPase; KEGG: she:Shewmr4_2522 ATPase central domain- containing protein; Belongs to the AAA ATPase family.
   
 
 0.471
Elen_2409
Hypothetical protein; KEGG: bha:BH3707 acetobutylicum phosphotransbutyrylase.
       0.457
Elen_2126
KEGG: amc:MADE_01582 hypothetical protein.
  
  
 0.453
Your Current Organism:
Eggerthella lenta
NCBI taxonomy Id: 479437
Other names: E. lenta DSM 2243, Eggerthella lenta DSM 2243, Eggerthella lenta str. DSM 2243, Eggerthella lenta strain DSM 2243
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.