STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Elen_2411PFAM: ParB domain protein nuclease; SMART: ParB domain protein nuclease; KEGG: sit:TM1040_3405 ParB-like nuclease. (284 aa)    
Predicted Functional Partners:
Elen_1508
Hypothetical protein.
  
     0.736
Elen_0794
Hypothetical protein.
  
     0.735
Elen_0791
Type IV secretory pathway VirB4 protein-like protein; KEGG: bca:BCE_A0025 hypothetical protein.
 
   
 0.730
Elen_1505
Type IV secretory pathway VirB4 protein-like protein; KEGG: bca:BCE_A0025 hypothetical protein.
 
   
 0.728
Elen_0936
PFAM: Cobyrinic acid ac-diamide synthase; KEGG: mag:amb0004 ATPase involved in chromosome partitioning.
 
 
 0.703
Elen_1502
PFAM: TRAG family protein; KEGG: mes:Meso_4169 TraG protein.
 
   
 0.701
Elen_1524
PFAM: Cobyrinic acid ac-diamide synthase; KEGG: dar:Daro_4105 chromosome segregation ATPase.
 
 
 0.701
Elen_0788
PFAM: TRAG family protein; KEGG: dps:DPPA13 related to plasmid transfer complex protein TrsK/TraK.
 
   
 0.700
Elen_1510
PFAM: Cna B domain protein; KEGG: bce:BC3526 collagen adhesion protein.
  
   
 0.659
Elen_0832
KEGG: xac:XACa0041 partition protein A.
  
 
 0.642
Your Current Organism:
Eggerthella lenta
NCBI taxonomy Id: 479437
Other names: E. lenta DSM 2243, Eggerthella lenta DSM 2243, Eggerthella lenta str. DSM 2243, Eggerthella lenta strain DSM 2243
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.