STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Elen_2598PFAM: endodeoxyribonuclease RusA; KEGG: rsh:Rsph17029_0662 endodeoxyribonuclease RusA. (141 aa)    
Predicted Functional Partners:
Elen_2596
Hypothetical protein.
       0.773
Elen_2597
Hypothetical protein.
       0.773
Elen_2599
Hypothetical protein.
       0.773
Elen_2601
KEGG: apj:APJL_0347 putative lipoprotein.
       0.653
Elen_2605
KEGG: dps:DP2024 hypothetical protein.
  
    0.650
Elen_2603
Hypothetical protein.
       0.647
Elen_2602
PFAM: ERF family protein; KEGG: seh:SeHA_C0373 essential recombination function protein.
       0.633
Elen_2604
TIGRFAM: single-strand binding protein; PFAM: single-strand binding protein/Primosomal replication protein n; KEGG: dac:Daci_0817 single-strand binding protein.
       0.633
Elen_2600
Hypothetical protein.
       0.620
Elen_2606
DNA replication protein-like protein; KEGG: hha:Hhal_0638 IstB domain protein ATP-binding protein.
  
  
 0.585
Your Current Organism:
Eggerthella lenta
NCBI taxonomy Id: 479437
Other names: E. lenta DSM 2243, Eggerthella lenta DSM 2243, Eggerthella lenta str. DSM 2243, Eggerthella lenta strain DSM 2243
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.