STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Elen_2619Hypothetical protein. (72 aa)    
Predicted Functional Partners:
Elen_2618
Hypothetical protein.
       0.773
Elen_2620
Hypothetical protein.
       0.773
Elen_2621
Hypothetical protein.
       0.773
Elen_2622
TIGRFAM: phage terminase, large subunit, PBSX family; PFAM: terminase large subunit; KEGG: bcy:Bcer98_2947 PBSX family phage terminase large subunit.
       0.485
Elen_2623
Hypothetical protein.
       0.429
Elen_2624
Hypothetical protein; KEGG: GK24224 gene product from transcript GK24224- RA.
       0.429
Elen_2625
Hypothetical protein.
       0.429
Elen_2606
DNA replication protein-like protein; KEGG: hha:Hhal_0638 IstB domain protein ATP-binding protein.
       0.426
Elen_2607
PFAM: DNA methylase N-4/N-6 domain protein; KEGG: bch:Bcen2424_6933 DNA methylase N-4/N-6 domain-containing protein; Belongs to the N(4)/N(6)-methyltransferase family.
       0.426
Elen_2608
PFAM: DNA methylase N-4/N-6 domain protein; KEGG: dde:Dde_1300 adenine specific DNA methyltransferase, putative; Belongs to the N(4)/N(6)-methyltransferase family.
       0.426
Your Current Organism:
Eggerthella lenta
NCBI taxonomy Id: 479437
Other names: E. lenta DSM 2243, Eggerthella lenta DSM 2243, Eggerthella lenta str. DSM 2243, Eggerthella lenta strain DSM 2243
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