STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Elen_2882PFAM: major facilitator superfamily MFS_1; KEGG: bch:Bcen2424_0180 major facilitator transporter. (421 aa)    
Predicted Functional Partners:
Elen_2881
PFAM: NADH:flavin oxidoreductase/NADH oxidase; FAD- dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: dal:Dalk_4846 NADH:flavin oxidoreductase/NADH oxidase.
 
     0.590
Elen_2879
PFAM: AMP-dependent synthetase and ligase; beta- lactamase domain protein; KEGG: rpd:RPD_1133 AMP-dependent synthetase and ligase.
     
 0.513
Elen_2880
PFAM: Enoyl-CoA hydratase/isomerase; KEGG: cti:RALTA_B0546 putative enoyl-CoA hydratase/isomerase.
     
 0.512
Elen_2883
PFAM: L-carnitine dehydratase/bile acid-inducible protein F; KEGG: eum:ECUMN_0040 crotonobetainyl CoA:carnitine CoA transferase; Belongs to the CoA-transferase III family.
       0.438
Elen_2878
PFAM: acyl-CoA dehydrogenase domain protein; Acyl- CoA dehydrogenase type 2 domain; KEGG: stm:STM1356 putative acyl-CoA dehydrogenase.
       0.432
Elen_2025
PFAM: extracellular solute-binding protein family 1; KEGG: vco:VC0395_0545 ABC transporter, periplasmic substrate-binding protein.
  
  
 0.425
Elen_2031
KEGG: reh:H16_B1950 ABC-type transporter, periplasmic component.
  
  
 0.425
Elen_2877
KEGG: dal:Dalk_2661 wyosine base formation.
       0.418
Your Current Organism:
Eggerthella lenta
NCBI taxonomy Id: 479437
Other names: E. lenta DSM 2243, Eggerthella lenta DSM 2243, Eggerthella lenta str. DSM 2243, Eggerthella lenta strain DSM 2243
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.