STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PHMEG_0004162740S ribosomal protein S21; Belongs to the eukaryotic ribosomal protein eS21 family. (79 aa)    
Predicted Functional Partners:
PHMEG_00041553
40S ribosomal protein S20.
   
 0.999
PHMEG_00037831
40S ribosomal protein S9-1; Belongs to the universal ribosomal protein uS4 family.
   
 0.999
PHMEG_00036176
40S ribosomal protein.
   
 0.999
PHMEG_00033779
40S ribosomal protein S3-3.
   
 0.999
PHMEG_00032145
40S ribosomal protein S19-3.
   
 0.999
PHMEG_00026465
40S ribosomal protein S26; Belongs to the eukaryotic ribosomal protein eS26 family.
   
 0.999
PHMEG_00022705
40S ribosomal protein S7; Belongs to the eukaryotic ribosomal protein eS7 family.
   
 0.999
PHMEG_00020891
40S ribosomal protein S24; Belongs to the eukaryotic ribosomal protein eS24 family.
   
 0.999
PHMEG_00021451
40S ribosomal protein S3a; Belongs to the eukaryotic ribosomal protein eS1 family.
   
 0.999
PHMEG_00015499
40S ribosomal protein S28.
   
 0.999
Your Current Organism:
Phytophthora megakarya
NCBI taxonomy Id: 4795
Other names: ATCC 42100, CBS 238.83, IMI 202077, P. megakarya
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.