STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PHMEG_00040802Aquaporin; Belongs to the MIP/aquaporin (TC 1.A.8) family. (133 aa)    
Predicted Functional Partners:
KATNAL2
Katanin p60 ATPase-containing subunit A-like 2; Severs microtubules in vitro in an ATP-dependent manner. This activity may promote rapid reorganization of cellular microtubule arrays.
  
 0.575
PHMEG_00019222
Radial spoke protein 11.
    
 
 0.566
PHMEG_00022569
Clathrin assembly complex protein; Belongs to the adaptor complexes medium subunit family.
    
 
 0.531
PHMEG_00013037
AP-4 complex subunit mu-1; Belongs to the adaptor complexes medium subunit family.
    
 
 0.531
PHMEG_000971
Radial spoke protein.
    
 
 0.531
PHMEG_00040899
Sedoheptulokinase.
  
 
  0.530
PHMEG_00040581
26S protease regulatory protein; Belongs to the AAA ATPase family.
  
 
  0.530
PHMEG_00040362
Sedoheptulokinase.
  
 
  0.530
PHMEG_00040301
Katanin; Belongs to the AAA ATPase family.
  
 
  0.530
PHMEG_00034061
Sedoheptulokinase.
  
 
  0.530
Your Current Organism:
Phytophthora megakarya
NCBI taxonomy Id: 4795
Other names: ATCC 42100, CBS 238.83, IMI 202077, P. megakarya
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.