Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
PHMEG_00011877 | PHMEG_00017875 | A0A225WAG5 | A0A225VWZ8 | RNA polymerase II subunit A Cterminal domain phosphatase. | C2H2-type domain-containing protein. | 0.551 |
PHMEG_00011877 | PHMEG_00029676 | A0A225WAG5 | A0A225V1X7 | RNA polymerase II subunit A Cterminal domain phosphatase. | Suppressor of necrosis 1. | 0.551 |
PHMEG_00011877 | PHMEG_00039309 | A0A225WAG5 | A0A225UFP7 | RNA polymerase II subunit A Cterminal domain phosphatase. | RNA polymerase II subunit A C-terminal domain phosphatase. | 0.902 |
PHMEG_00011877 | PHMEG_00040972 | A0A225WAG5 | A0A225UDT1 | RNA polymerase II subunit A Cterminal domain phosphatase. | RNA_GG_bind domain-containing protein. | 0.569 |
PHMEG_00011877 | PHMEG_0005556 | A0A225WAG5 | A0A225WSP7 | RNA polymerase II subunit A Cterminal domain phosphatase. | CID domain-containing protein. | 0.880 |
PHMEG_0001375 | PHMEG_00031366 | A0A225X1Z4 | A0A225UYF8 | GTP-binding nuclear protein; GTP-binding protein involved in nucleocytoplasmic transport. Required for the import of protein into the nucleus and also for RNA export. Involved in chromatin condensation and control of cell cycle. Belongs to the small GTPase superfamily. Ran family. | Nuclear cap-binding protein subunit 2. | 0.902 |
PHMEG_0001375 | PHMEG_00040972 | A0A225X1Z4 | A0A225UDT1 | GTP-binding nuclear protein; GTP-binding protein involved in nucleocytoplasmic transport. Required for the import of protein into the nucleus and also for RNA export. Involved in chromatin condensation and control of cell cycle. Belongs to the small GTPase superfamily. Ran family. | RNA_GG_bind domain-containing protein. | 0.906 |
PHMEG_00017875 | PHMEG_00011877 | A0A225VWZ8 | A0A225WAG5 | C2H2-type domain-containing protein. | RNA polymerase II subunit A Cterminal domain phosphatase. | 0.551 |
PHMEG_00017875 | PHMEG_00031366 | A0A225VWZ8 | A0A225UYF8 | C2H2-type domain-containing protein. | Nuclear cap-binding protein subunit 2. | 0.944 |
PHMEG_00017875 | PHMEG_00039309 | A0A225VWZ8 | A0A225UFP7 | C2H2-type domain-containing protein. | RNA polymerase II subunit A C-terminal domain phosphatase. | 0.551 |
PHMEG_00017875 | PHMEG_00040972 | A0A225VWZ8 | A0A225UDT1 | C2H2-type domain-containing protein. | RNA_GG_bind domain-containing protein. | 0.756 |
PHMEG_00017875 | PHMEG_0005556 | A0A225VWZ8 | A0A225WSP7 | C2H2-type domain-containing protein. | CID domain-containing protein. | 0.614 |
PHMEG_00023144 | PHMEG_00040972 | A0A225VHR6 | A0A225UDT1 | HECT E3 ubiquitin ligase. | RNA_GG_bind domain-containing protein. | 0.502 |
PHMEG_00024711 | PHMEG_00040972 | A0A225VEJ9 | A0A225UDT1 | HECT E3 ubiquitin ligase. | RNA_GG_bind domain-containing protein. | 0.502 |
PHMEG_00029602 | PHMEG_00040972 | A0A225V366 | A0A225UDT1 | HECT domain-containing protein. | RNA_GG_bind domain-containing protein. | 0.502 |
PHMEG_00029676 | PHMEG_00011877 | A0A225V1X7 | A0A225WAG5 | Suppressor of necrosis 1. | RNA polymerase II subunit A Cterminal domain phosphatase. | 0.551 |
PHMEG_00029676 | PHMEG_00031366 | A0A225V1X7 | A0A225UYF8 | Suppressor of necrosis 1. | Nuclear cap-binding protein subunit 2. | 0.944 |
PHMEG_00029676 | PHMEG_00039309 | A0A225V1X7 | A0A225UFP7 | Suppressor of necrosis 1. | RNA polymerase II subunit A C-terminal domain phosphatase. | 0.551 |
PHMEG_00029676 | PHMEG_00040972 | A0A225V1X7 | A0A225UDT1 | Suppressor of necrosis 1. | RNA_GG_bind domain-containing protein. | 0.756 |
PHMEG_00029676 | PHMEG_0005556 | A0A225V1X7 | A0A225WSP7 | Suppressor of necrosis 1. | CID domain-containing protein. | 0.614 |
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