STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PHMEG_00040362Sedoheptulokinase. (130 aa)    
Predicted Functional Partners:
PHMEG_0004501
26S proteasome non-ATPase regulatory protein.
   
 0.857
PHMEG_0009497
26S proteasome non-ATPase regulatory protein.
   
 0.841
PHMEG_0003140
26S proteasome non-ATPase regulatory protein.
   
 0.841
PHMEG_00015518
26S proteasome non-ATPase regulatory protein.
   
 0.838
PHMEG_00023279
26S proteasome non-ATPase regulatory protein.
   
 0.837
PHMEG_0008820
Ubiquitin carboxyl-terminal hydrolase.
   
 0.831
PHMEG_0007822
26S proteasome non-ATPase regulatory protein; Belongs to the proteasome subunit S1 family.
   
 0.827
PHMEG_00015838
Proteasome subunit beta type-6.
   
 0.822
PHMEG_00023886
Proteasome subunit beta; Belongs to the peptidase T1B family.
   
 0.814
PHMEG_0008212
26S proteasome non-ATPase regulatory protein.
   
 0.802
Your Current Organism:
Phytophthora megakarya
NCBI taxonomy Id: 4795
Other names: ATCC 42100, CBS 238.83, IMI 202077, P. megakarya
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.