STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PHMEG_00039382HTH CENPB-type domain-containing protein. (271 aa)    
Predicted Functional Partners:
PHMEG_00015038
HTH CENPB-type domain-containing protein.
  
     0.533
PHMEG_00018523
Tigger transposable element derived 4.
  
     0.522
PHMEG_00016927
Tigger transposable element derived 4.
  
     0.521
PHMEG_00028335
Tigger transposable element-derived protein.
  
     0.471
PHMEG_00011069
CENPB protein Homeodomainlike.
  
     0.463
PHMEG_00033586
DDE-1 domain-containing protein.
  
     0.460
PHMEG_00021373
DDE-1 domain-containing protein.
  
     0.459
PHMEG_00025768
DDE-1 domain-containing protein.
  
     0.453
Your Current Organism:
Phytophthora megakarya
NCBI taxonomy Id: 4795
Other names: ATCC 42100, CBS 238.83, IMI 202077, P. megakarya
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.