STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PHMEG_00039232Uncharacterized protein. (169 aa)    
Predicted Functional Partners:
PHMEG_0009141
Vacuolar protein sorting-associated protein 29; Belongs to the VPS29 family.
    
 
 0.641
PHMEG_00014486
Retroelement.
    
 
 0.639
PHMEG_0007384
Uncharacterized protein.
    
  0.615
PHMEG_00016898
PX domain-containing protein.
    
 0.593
PHMEG_00027799
Clathrin heavy chain.
    
 0.585
PHMEG_00017152
AP-3 complex subunit beta.
    
 0.554
PHMEG_00034642
AP complex subunit sigma; Belongs to the adaptor complexes small subunit family.
    
  0.542
PHMEG_00037122
AP complex subunit sigma; Belongs to the adaptor complexes small subunit family.
     
 0.534
PHMEG_00036610
Phosphatidylinositol kinase; Belongs to the PI3/PI4-kinase family.
   
 
  0.532
PHMEG_000330
AP-1 complex subunit gamma.
     
 0.497
Your Current Organism:
Phytophthora megakarya
NCBI taxonomy Id: 4795
Other names: ATCC 42100, CBS 238.83, IMI 202077, P. megakarya
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