STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
PHMEG_00038137Respiratory burst oxidase. (171 aa)    
Predicted Functional Partners:
PHMEG_0007063
Ferric reductase.
     
  0.785
PHMEG_00014377
Ras-like protein.
    
 0.626
PHMEG_00018622
FAD-binding FR-type domain-containing protein.
     
  0.602
PHMEG_00017061
FAD-binding FR-type domain-containing protein.
     
  0.602
PHMEG_0007767
FAD-binding FR-type domain-containing protein.
     
  0.602
PHMEG_0001958
Ferric reductase.
     
  0.602
PHMEG_0009300
Elicitin.
     
 0.476
PHMEG_00037993
Uncharacterized protein.
    
  0.465
PHMEG_00029292
Uncharacterized protein.
    
  0.465
PHMEG_00016063
Serine/threonine protein phosphatase 2A.
    
  0.465
Your Current Organism:
Phytophthora megakarya
NCBI taxonomy Id: 4795
Other names: ATCC 42100, CBS 238.83, IMI 202077, P. megakarya
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.