Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
PHMEG_00037999Uncharacterized protein. (203 aa)    
Predicted Functional Partners:
PHMEG_00019004
Mitochondrial Protein Translocase.
    
  0.594
PHMEG_0009687
Metalloprotease.
    
 0.574
PHMEG_0009686
Metalloprotease.
    
  0.566
PHMEG_0005206
26S proteasome non-ATPase regulatory protein.
    
  0.566
PHMEG_00014458
60S ribosomal protein L11; Belongs to the universal ribosomal protein uL5 family.
    
  0.513
PHMEG_00013072
Ribonucloprotein; Common component of the spliceosome and rRNA processing machinery; Belongs to the eukaryotic ribosomal protein eL8 family.
    
  0.459
PHMEG_00016730
Uncharacterized protein.
    
 0.454
PHMEG_0006895
Double-strand break repair protein; Involved in DNA double-strand break repair (DSBR). Possesses single-strand endonuclease activity and double-strand-specific 3'-5' exonuclease activity. Also involved in meiotic DSB processing.
    
  0.452
PHMEG_00023270
Putative mitochondrial protein; Belongs to the complex I LYR family.
    
 
 0.442
PHMEG_00024780
Glycerophosphoryl diester phosphodiesterase.
    
  0.433
Your Current Organism:
Phytophthora megakarya
NCBI taxonomy Id: 4795
Other names: ATCC 42100, CBS 238.83, IMI 202077, P. megakarya
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