STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PHMEG_00035473Uncharacterized protein. (484 aa)    
Predicted Functional Partners:
PHMEG_00017893
Ubiquitin-like modifier-activating enzyme ATG7; E1-like activating enzyme involved in the 2 ubiquitin-like systems required for autophagy.
     
 0.567
PHMEG_00010692
Uncharacterized protein.
     
 0.567
PHMEG_0004851
Ubiquitin activating enzyme.
     
 0.567
PHMEG_0002107
Uncharacterized protein.
   
  0.567
PHMEG_00015848
HECT E3 ubiquitin ligase.
   
 
 0.541
PHMEG_0007666
HECT E3 ubiquitin ligase.
   
 
 0.541
PHMEG_00022169
Uncharacterized protein.
    
 0.538
PHMEG_0006205
Ubiquitin activating enzyme; Belongs to the ubiquitin-activating E1 family.
   
 
 0.532
PHMEG_0001347
UBA_e1_C domain-containing protein; Belongs to the ubiquitin-activating E1 family.
   
 
 0.532
PHMEG_00020623
NEDD8-activating enzyme E1 regulatory subunit.
     
 0.517
Your Current Organism:
Phytophthora megakarya
NCBI taxonomy Id: 4795
Other names: ATCC 42100, CBS 238.83, IMI 202077, P. megakarya
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