STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PHMEG_00036491Uncharacterized protein. (529 aa)    
Predicted Functional Partners:
PHMEG_0001344
Amidophosphoribosyltransferase.
  
 0.957
PHMEG_00023946
Phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase.
  
 
 0.905
PHMEG_0008392
Urease accessory protein.
  
 
 0.900
PHMEG_00018657
Phosphoribosylaminoimidazole-succinocarboxamide synthase.
  
 0.895
PHMEG_0001514
Phosphoribosylaminoimidazole carboxylase.
  
 0.895
PHMEG_000278
1-(5-phosphoribosyl)-5-amino-4-imidazole-carboxylate carboxylase.
  
 0.895
PHMEG_0001852
Adenylosuccinate lyase; Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily.
  
  
 0.879
PHMEG_0004187
Formate-tetrahydrofolate ligase.
  
 
 0.780
PHMEG_0008633
Serine hydroxymethyltransferase; Interconversion of serine and glycine. Belongs to the SHMT family.
  
  
 0.718
PHMEG_0006560
Serine hydroxymethyltransferase; Interconversion of serine and glycine. Belongs to the SHMT family.
  
  
 0.718
Your Current Organism:
Phytophthora megakarya
NCBI taxonomy Id: 4795
Other names: ATCC 42100, CBS 238.83, IMI 202077, P. megakarya
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.