STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PHMEG_00034791Pol Polyprotein. (148 aa)    
Predicted Functional Partners:
PHMEG_0005814
60S ribosomal protein L21-1.
   
   0.705
PHMEG_00023270
Putative mitochondrial protein; Belongs to the complex I LYR family.
    
 0.680
PHMEG_00023583
Ribosomal protein L13.
   
   0.673
PHMEG_0003818
60S ribosomal protein.
   
 
 0.644
PHMEG_0006895
Double-strand break repair protein; Involved in DNA double-strand break repair (DSBR). Possesses single-strand endonuclease activity and double-strand-specific 3'-5' exonuclease activity. Also involved in meiotic DSB processing.
    
  0.626
PHMEG_00016572
60S ribosomal protein.
   
   0.608
PHMEG_000639
Mitochondrial/chloroplast ribosomal protein L13; Belongs to the universal ribosomal protein uL13 family.
   
   0.607
PHMEG_00019004
Mitochondrial Protein Translocase.
    
  0.572
PHMEG_0009687
Metalloprotease.
    
 0.548
PHMEG_0002836
40S ribosomal protein S29.
    
 
 0.546
Your Current Organism:
Phytophthora megakarya
NCBI taxonomy Id: 4795
Other names: ATCC 42100, CBS 238.83, IMI 202077, P. megakarya
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.