STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PHMEG_000340113-ketodihydrosphingosine reductase. (347 aa)    
Predicted Functional Partners:
PHMEG_0003312
GPI-anchor transamidase.
   
 
 0.907
PHMEG_0004686
GPI ethanolamine phosphate transferase.
    
 0.905
PHMEG_00011403
Serine palmitoyltransferase.
     
 0.897
PHMEG_00011630
Mannosyltransferase.
   
 
 0.894
PHMEG_00026209
GPI transamidase component.
     
 0.886
PHMEG_00020647
GPI transamidase component.
     
 0.886
PHMEG_00068
Uncharacterized protein.
    
 0.884
PHMEG_00029594
GPI ethanolamine phosphate transferase.
    
 0.882
PHMEG_00018566
GPI ethanolamine phosphate transferase.
    
 0.882
PHMEG_00016846
Fatty acid desaturase; Belongs to the fatty acid desaturase type 1 family. DEGS subfamily.
   
 
 0.880
Your Current Organism:
Phytophthora megakarya
NCBI taxonomy Id: 4795
Other names: ATCC 42100, CBS 238.83, IMI 202077, P. megakarya
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.