STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PHMEG_00033614Uncharacterized protein. (411 aa)    
Predicted Functional Partners:
PHMEG_00016034
Uncharacterized protein.
    
 0.716
PHMEG_00011735
Intraflagellar Transport Protein 81.
    
 0.712
PHMEG_00031992
Catalase.
    
  0.700
PHMEG_00018452
Intraflagellar Transport Protein 52.
    
 0.634
PHMEG_0005279
Serine/threonine-protein phosphatase.
    
  0.610
PHMEG_0001390
Intraflagellar Transport protein 80.
    
 0.558
PHMEG_00020649
Intraflagellar transport protein 172.
    
 0.556
PHMEG_00033569
Clusterin-associated protein 1.
    
  0.547
PHMEG_00010541
Uncharacterized protein.
    
  0.546
PHMEG_00011983
Uncharacterized protein.
    
  0.542
Your Current Organism:
Phytophthora megakarya
NCBI taxonomy Id: 4795
Other names: ATCC 42100, CBS 238.83, IMI 202077, P. megakarya
Server load: medium (48%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.