Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
PHMEG_00033401Putative mitochondrial protein. (261 aa)    
Predicted Functional Partners:
PHMEG_00012674
AP complex subunit beta.
    
  0.475
PHMEG_00011260
AP complex subunit beta; Belongs to the adaptor complexes large subunit family.
    
  0.475
PHMEG_0001927
AP-2 complex subunit alpha; Adaptins are components of the adaptor complexes which link clathrin to receptors in coated vesicles. Clathrin-associated protein complexes are believed to interact with the cytoplasmic tails of membrane proteins, leading to their selection and concentration.
    
  0.467
PHMEG_0004677
Uncharacterized protein.
    
  0.461
PHMEG_00031543
Calcineurin-like phosphoesterase.
    
 0.459
PHMEG_00032376
PDZ domain-containing protein.
    
  0.440
PHMEG_000904
Ubiquitin family protein.
    
  0.440
PHMEG_00016846
Fatty acid desaturase; Belongs to the fatty acid desaturase type 1 family. DEGS subfamily.
     
 0.429
PHMEG_00033768
Major Facilitator Superfamily (MFS) transporter.
     
 0.428
PHMEG_0009517
Uncharacterized protein.
     
  0.415
Your Current Organism:
Phytophthora megakarya
NCBI taxonomy Id: 4795
Other names: ATCC 42100, CBS 238.83, IMI 202077, P. megakarya
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