STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PHMEG_00031992Catalase. (91 aa)    
Predicted Functional Partners:
PHMEG_00011735
Intraflagellar Transport Protein 81.
    
 0.972
PHMEG_00018452
Intraflagellar Transport Protein 52.
   
 0.929
PHMEG_00020649
Intraflagellar transport protein 172.
    
 0.916
PHMEG_0001390
Intraflagellar Transport protein 80.
   
 0.913
PHMEG_00033569
Clusterin-associated protein 1.
    
 0.896
PHMEG_0003071
Intraflagellar Transport Protein 57.
   
 0.880
PHMEG_000302
NEK protein kinase.
   
 0.880
PHMEG_00030935
Intraflagellar transport protein 27.
    
 0.878
PHMEG_00011983
Uncharacterized protein.
    
 0.877
PHMEG_00011169
Intraflagellar Transport Protein 88.
    
 0.867
Your Current Organism:
Phytophthora megakarya
NCBI taxonomy Id: 4795
Other names: ATCC 42100, CBS 238.83, IMI 202077, P. megakarya
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.