STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PHMEG_00031939Uncharacterized protein. (511 aa)    
Predicted Functional Partners:
PHMEG_0005948
Rab5 family GTPase.
    
 0.867
PHMEG_0001637
Rab5 family GTPase.
    
 0.867
PHMEG_0006683
Rab21/Rab5 family GTPase.
    
 0.784
PHMEG_0004618
Rab21/Rab5 family GTPase.
    
 0.784
PHMEG_0009141
Vacuolar protein sorting-associated protein 29; Belongs to the VPS29 family.
    
 
 0.746
PHMEG_00016034
Uncharacterized protein.
    
  0.706
PHMEG_00010596
Rab GDP dissociation inhibitor; Belongs to the Rab GDI family.
    
 0.628
PHMEG_0005279
Serine/threonine-protein phosphatase.
    
  0.610
PHMEG_00040581
26S protease regulatory protein; Belongs to the AAA ATPase family.
    
  0.608
PHMEG_0004591
26S protease regulatory protein; Belongs to the AAA ATPase family.
    
  0.608
Your Current Organism:
Phytophthora megakarya
NCBI taxonomy Id: 4795
Other names: ATCC 42100, CBS 238.83, IMI 202077, P. megakarya
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.