STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PHMEG_00032067Serine protease trypsin-like protein; Belongs to the peptidase S1 family. (261 aa)    
Predicted Functional Partners:
PHMEG_00015742
Uncharacterized protein.
    
 
 0.611
PHMEG_00013350
MHYT domain-containing protein.
    
 0.603
PHMEG_00013349
MHYT domain-containing protein.
    
 0.603
PHMEG_00031323
Uncharacterized protein.
    
 0.598
PHMEG_0003953
Uncharacterized protein.
    
 0.598
PHMEG_00010326
Enkurin domain-containing protein.
    
 
 0.515
PHMEG_00011489
Dynactin subunit 5.
    
   0.514
PHMEG_000571
Dynactin light chain p62 subunit.
    
   0.513
PHMEG_0001117
Uncharacterized protein.
    
   0.507
PHMEG_0009300
Elicitin.
    
 0.497
Your Current Organism:
Phytophthora megakarya
NCBI taxonomy Id: 4795
Other names: ATCC 42100, CBS 238.83, IMI 202077, P. megakarya
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.