STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PHMEG_00029570DDE Tnp4 domain-containing protein. (372 aa)    
Predicted Functional Partners:
PHMEG_00027065
Uncharacterized protein.
  
     0.535
PHMEG_00022399
Uncharacterized protein.
  
     0.535
PHMEG_00031216
Uncharacterized protein.
  
     0.529
PHMEG_0009735
DDE Tnp4 domain-containing protein.
  
     0.528
PHMEG_00012978
Uncharacterized protein.
  
     0.525
PHMEG_00039483
Uncharacterized protein.
  
     0.512
PHMEG_00013163
Uncharacterized protein.
  
     0.508
PHMEG_00019816
Uncharacterized protein.
  
     0.504
Your Current Organism:
Phytophthora megakarya
NCBI taxonomy Id: 4795
Other names: ATCC 42100, CBS 238.83, IMI 202077, P. megakarya
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.