STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PHMEG_00029315Uncharacterized protein. (115 aa)    
Predicted Functional Partners:
PHMEG_00021310
Methionine-tRNA ligase, beta subunit.
   
 0.786
PHMEG_00018227
DNA-directed RNA polymerase I and III subunit RPAC1.
   
   0.541
PHMEG_00012722
60S acidic ribosomal protein P0; Ribosomal protein P0 is the functional equivalent of E.coli protein L10.
   
   0.408
PHMEG_00038115
EF1_GNE domain-containing protein; Belongs to the FBPase class 1 family.
   
  0.403
PHMEG_00017517
EF1_GNE domain-containing protein.
   
  0.403
Your Current Organism:
Phytophthora megakarya
NCBI taxonomy Id: 4795
Other names: ATCC 42100, CBS 238.83, IMI 202077, P. megakarya
Server load: low (24%) [HD]