STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PHMEG_00028773Porphobilinogen deaminase. (257 aa)    
Predicted Functional Partners:
PHMEG_0003296
Delta-aminolevulinic acid dehydratase; Belongs to the ALAD family.
 
 0.967
PHMEG_00032325
Uroporphyrinogen-III synthase.
  
 0.942
PHMEG_00014010
Uroporphyrinogen decarboxylase.
 
 0.836
PHMEG_00015740
Tetrapyrrole (Corrin/Porphyrin) Methylase; Belongs to the precorrin methyltransferase family.
 
 
 0.807
PHMEG_0007034
Tetrapyrrole (Corrin/Porphyrin) Methylase.
 
 
 0.799
PHMEG_0006520
Bifunctional dihydrofolate reductase-thymidylate synthase; Bifunctional enzyme. Involved in de novo dTMP biosynthesis. Key enzyme in folate metabolism; In the C-terminal section; belongs to the thymidylate synthase family.
  
 
 0.458
PHMEG_000493
RNA helicase.
   
  
 0.414
PHMEG_0002924
Serine hydrolase (FSH1).
    
 0.409
PHMEG_0009312
Sugar fermentation stimulation protein.
     
 0.401
Your Current Organism:
Phytophthora megakarya
NCBI taxonomy Id: 4795
Other names: ATCC 42100, CBS 238.83, IMI 202077, P. megakarya
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