STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PHMEG_00029422Pyruvate kinase; Belongs to the pyruvate kinase family. (284 aa)    
Predicted Functional Partners:
PHMEG_00018905
Enolase.
  
 0.940
PHMEG_000368
Phosphopyruvate hydratase.
  
 0.935
PHMEG_00014307
40S ribosomal protein S15; Belongs to the universal ribosomal protein uS19 family.
  
 0.930
PHMEG_0007214
Fructose-bisphosphate aldolase.
  
 0.907
PHMEG_00041467
Pyruvate kinase; Belongs to the pyruvate kinase family.
 
     0.896
PHMEG_0003818
60S ribosomal protein.
  
 
 0.892
PHMEG_00013772
60S ribosomal protein L5.
  
 
 0.890
PHMEG_00015868
Pyruvate carboxylase; Catalyzes a 2-step reaction, involving the ATP-dependent carboxylation of the covalently attached biotin in the first step and the transfer of the carboxyl group to pyruvate in the second.
   
 0.889
PHMEG_00019517
Transketolase; Catalyzes the transfer of a two-carbon ketol group from a ketose donor to an aldose acceptor, via a covalent intermediate with the cofactor thiamine pyrophosphate.
  
 0.886
PHMEG_00014458
60S ribosomal protein L11; Belongs to the universal ribosomal protein uL5 family.
  
 
 0.885
Your Current Organism:
Phytophthora megakarya
NCBI taxonomy Id: 4795
Other names: ATCC 42100, CBS 238.83, IMI 202077, P. megakarya
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