STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PHMEG_00027566Tetraacyldisaccharide 4'-kinase. (383 aa)    
Predicted Functional Partners:
PHMEG_00010541
Uncharacterized protein.
    
 0.714
PHMEG_00029833
Uncharacterized protein.
    
  0.650
PHMEG_00041553
40S ribosomal protein S20.
    
  0.623
PHMEG_00040253
Nitrate reductase.
    
  0.618
PHMEG_00036845
Nitrate reductase.
    
  0.618
PHMEG_00031759
Nitrate reductase.
    
  0.618
PHMEG_00028480
Nitrate reductase.
    
  0.618
PHMEG_0008259
Nitrate reductase.
    
  0.618
PHMEG_0001530
Cytochrome b5 heme-binding domain-containing protein; Belongs to the cytochrome b5 family.
    
  0.618
PHMEG_0002836
40S ribosomal protein S29.
    
  0.614
Your Current Organism:
Phytophthora megakarya
NCBI taxonomy Id: 4795
Other names: ATCC 42100, CBS 238.83, IMI 202077, P. megakarya
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.