STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PHMEG_00028294Ribosomal protein L15. (250 aa)    
Predicted Functional Partners:
PHMEG_00031030
Mitochondrial/chloroplast ribosomal protein S9; Belongs to the universal ribosomal protein uS9 family.
  
 
 0.997
PHMEG_00027551
Ribosomal protein L17; Belongs to the bacterial ribosomal protein bL17 family.
  
 
 0.997
PHMEG_00015665
50S ribosomal protein L3.
 
 0.997
PHMEG_0007723
40S ribosomal protein S5-2; Belongs to the universal ribosomal protein uS7 family.
  
 
 0.997
PHMEG_0002886
Ribosomal protein; Belongs to the bacterial ribosomal protein bL36 family.
  
 
 0.997
PHMEG_0002533
Ribosomal protein L22; Belongs to the universal ribosomal protein uL22 family.
  
 0.997
PHMEG_000639
Mitochondrial/chloroplast ribosomal protein L13; Belongs to the universal ribosomal protein uL13 family.
  
 0.997
PHMEG_00030148
Ribosomal protein L16.
  
 0.996
PHMEG_00021623
Ribosomal protein L19.
   
 
 0.996
PHMEG_00021492
Ribosomal protein L11; Belongs to the universal ribosomal protein uL11 family.
  
 0.996
Your Current Organism:
Phytophthora megakarya
NCBI taxonomy Id: 4795
Other names: ATCC 42100, CBS 238.83, IMI 202077, P. megakarya
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.