STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PHMEG_00027828Uncharacterized protein. (1026 aa)    
Predicted Functional Partners:
PHMEG_00023117
WD_REPEATS_REGION domain-containing protein.
  
0.999
PHMEG_00019248
BP28CT domain-containing protein.
   
 0.999
PHMEG_00010207
U3 small nucleolar RNA-associated protein 18.
   
 0.999
PHMEG_00010332
U3 small nucleolar RNA-associated protein.
  
 0.999
PHMEG_0008971
U3 small nucleolar RNA-associated protein 6.
   
 0.999
PHMEG_0005656
U3 small nucleolar RNA-associated protein.
  
0.999
PHMEG_0005895
U3 small nucleolar RNA-associated protein.
   
 0.999
PHMEG_0004584
WD_REPEATS_REGION domain-containing protein.
  
 0.999
PHMEG_000187
Nucleolar protein 6.
   
 0.998
PHMEG_00032144
Nucleolar protein NOP5.
   
 0.997
Your Current Organism:
Phytophthora megakarya
NCBI taxonomy Id: 4795
Other names: ATCC 42100, CBS 238.83, IMI 202077, P. megakarya
Server load: medium (56%) [HD]