STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PHMEG_00025111Non-structural maintenance of chromosomes element 4; Component of the SMC5-SMC6 complex, that promotes sister chromatid alignment after DNA damage and facilitates double-stranded DNA breaks (DSBs) repair via homologous recombination between sister chromatids. (140 aa)    
Predicted Functional Partners:
PHMEG_00029288
RING-type domain-containing protein.
   
 0.998
PHMEG_0002568
SP-RING-type domain-containing protein.
    
 0.995
PHMEG_00020223
Kazal-type serine protease inhibitor.
   
 0.948
PHMEG_00014062
Formin like protein.
   
 0.948
PHMEG_00017073
Structural maintenance of chromosomes protein.
   
 0.925
PHMEG_00013345
Structural maintenance of chromosomes protein.
   
 0.925
PHMEG_0007195
Structural maintenance of chromosomes protein.
   
 0.900
PHMEG_00041622
Structural maintenance of chromosomes protein.
   
 0.888
PHMEG_00035925
Avr-associated TDF protein.
   
 0.888
PHMEG_00015651
ABC transporter.
   
 0.888
Your Current Organism:
Phytophthora megakarya
NCBI taxonomy Id: 4795
Other names: ATCC 42100, CBS 238.83, IMI 202077, P. megakarya
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