STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PHMEG_00023564Uncharacterized protein. (450 aa)    
Predicted Functional Partners:
PHMEG_00010541
Uncharacterized protein.
    
  0.571
PHMEG_0003097
Phosphatidylinositol kinase.
    
  0.548
PHMEG_00022783
WD_REPEATS_REGION domain-containing protein.
    
  0.543
PHMEG_00030960
Transcription initiation factor TFIID subunit.
    
   0.542
PHMEG_00014625
TBP-associated factor.
    
   0.540
PHMEG_0006848
TFIID_20kDa domain-containing protein.
    
   0.540
PHMEG_0003559
Phosphatidylinositol kinase; Belongs to the PI3/PI4-kinase family.
    
   0.540
PHMEG_0001644
Histone acetyltransferase.
    
   0.528
PHMEG_0009522
Transcription initiation factor TFIID subunit 6.
    
   0.527
PHMEG_00028294
Ribosomal protein L15.
    
   0.523
Your Current Organism:
Phytophthora megakarya
NCBI taxonomy Id: 4795
Other names: ATCC 42100, CBS 238.83, IMI 202077, P. megakarya
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.