STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PHMEG_0001568812-oxophytodienoate reductase. (378 aa)    
Predicted Functional Partners:
PHMEG_00035013
Electron transfer flavoprotein subunit beta.
   
 
 0.575
PHMEG_00039104
Alcohol dehydrogenase.
  
 
 0.424
PHMEG_00033180
Alcohol dehydrogenase.
  
 
 0.424
PHMEG_0007289
15-hydroxyprostaglandin dehydrogenase [NAD+]; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
  
 
 0.424
PHMEG_000994
15-hydroxyprostaglandin dehydrogenase [NAD+]; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
  
 
 0.424
PHMEG_0005775
Fumarylacetoacetase.
    
 0.423
PHMEG_0009317
Nitroreductase domain-containing protein.
    
 0.422
PHMEG_00018355
Hydroxyacyl-coenzyme A dehydrogenase.
  
 
 0.407
PHMEG_0002180
FMN_red domain-containing protein.
    
 0.403
Your Current Organism:
Phytophthora megakarya
NCBI taxonomy Id: 4795
Other names: ATCC 42100, CBS 238.83, IMI 202077, P. megakarya
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