STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PHMEG_00016216Medium-chain specific acyl-CoA dehydrogenase. (563 aa)    
Predicted Functional Partners:
PHMEG_0004967
Trifunctional enzyme subunit beta; Belongs to the thiolase-like superfamily. Thiolase family.
  
 0.965
PHMEG_00014379
Fatty acid oxidation complex, alpha subunit, mitochondrial; Belongs to the enoyl-CoA hydratase/isomerase family.
  
 0.958
PHMEG_00010694
Isovaleryl-CoA dehydrogenase.
  
0.956
PHMEG_0003784
3-ketoacyl-CoA thiolase; Belongs to the thiolase-like superfamily. Thiolase family.
  
 0.948
PHMEG_00041469
3-ketoacyl-CoA thiolase.
  
 0.939
PHMEG_00041463
3-ketoacyl-CoA thiolase.
  
 0.939
PHMEG_00041896
3-ketoacyl-CoA thiolase; Belongs to the thiolase-like superfamily. Thiolase family.
  
 0.939
PHMEG_00028472
Peroxisomal protein pox18.
  
 0.938
PHMEG_00036226
Choline/Carnitine O-acyltransferase; Belongs to the carnitine/choline acetyltransferase family.
   
 0.936
PHMEG_00018118
Choline/Carnitine O-acyltransferase.
   
 0.936
Your Current Organism:
Phytophthora megakarya
NCBI taxonomy Id: 4795
Other names: ATCC 42100, CBS 238.83, IMI 202077, P. megakarya
Server load: low (26%) [HD]