STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PHMEG_00013785Uncharacterized protein. (681 aa)    
Predicted Functional Partners:
PHMEG_00012581
GTP-binding protein Era; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. Era GTPase family.
    
  0.524
PHMEG_0001290
Dipeptidyl peptidase; Belongs to the peptidase S9B family.
    
   0.518
PHMEG_00031100
Ubiquitin-like domain-containing protein.
    
  0.507
PHMEG_00029328
Ubiquitin.
    
  0.507
PHMEG_00020722
Ubiquitin family protein.
    
  0.507
PHMEG_00019222
Radial spoke protein 11.
    
   0.482
PHMEG_0005102
Flagellar associated protein.
    
   0.482
PHMEG_0008820
Ubiquitin carboxyl-terminal hydrolase.
    
  0.478
PHMEG_00020335
WD_REPEATS_REGION domain-containing protein.
    
 0.474
PHMEG_00025643
Heat shock protein 90.
    
  0.467
Your Current Organism:
Phytophthora megakarya
NCBI taxonomy Id: 4795
Other names: ATCC 42100, CBS 238.83, IMI 202077, P. megakarya
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.