STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PHMEG_00012530Heme oxygenase. (245 aa)    
Predicted Functional Partners:
PHMEG_00015287
Iron donor protein CyaY.
     
 0.872
PHMEG_00023054
Protoheme IX farnesyltransferase.
     
 0.848
PHMEG_00031958
Dimeric dihydrodiol dehydrogenase.
     
 0.628
PHMEG_00026074
Dimeric dihydrodiol dehydrogenase.
     
 0.628
PHMEG_00013161
Oxidoreductase.
     
 0.628
PHMEG_0005966
Oxidoreductase.
     
 0.628
PHMEG_0005200
Oxidoreductase.
     
 0.628
PHMEG_00024720
Putative mitochondrial protein.
    
 
 0.613
PHMEG_00010716
2Fe-2S ferredoxin.
    
 
 0.613
PHMEG_0005937
2Fe-2S ferredoxin.
    
 
 0.613
Your Current Organism:
Phytophthora megakarya
NCBI taxonomy Id: 4795
Other names: ATCC 42100, CBS 238.83, IMI 202077, P. megakarya
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.