STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PHMEG_00011674Crinkler (CRN). (161 aa)    
Predicted Functional Partners:
PHMEG_000660
Histone chaperone ASF1.
    
 0.568
PHMEG_00014307
40S ribosomal protein S15; Belongs to the universal ribosomal protein uS19 family.
   
   0.534
PHMEG_00020891
40S ribosomal protein S24; Belongs to the eukaryotic ribosomal protein eS24 family.
   
   0.533
PHMEG_00015499
40S ribosomal protein S28.
   
   0.533
PHMEG_00015367
Protein HIRA; Required for replication-independent chromatin assembly and for the periodic repression of histone gene transcription during the cell cycle; Belongs to the WD repeat HIR1 family.
    
  0.533
PHMEG_0007723
40S ribosomal protein S5-2; Belongs to the universal ribosomal protein uS7 family.
   
   0.532
PHMEG_0002836
40S ribosomal protein S29.
   
   0.532
PHMEG_0009936
40S ribosomal protein S12; Belongs to the eukaryotic ribosomal protein eS12 family.
   
   0.526
PHMEG_00032145
40S ribosomal protein S19-3.
   
 
 0.524
PHMEG_00021451
40S ribosomal protein S3a; Belongs to the eukaryotic ribosomal protein eS1 family.
   
   0.514
Your Current Organism:
Phytophthora megakarya
NCBI taxonomy Id: 4795
Other names: ATCC 42100, CBS 238.83, IMI 202077, P. megakarya
Server load: low (14%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.