STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PHMEG_00010122Serine protease. (320 aa)    
Predicted Functional Partners:
PHMEG_00034024
Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis.
   
 0.750
PHMEG_0002948
Tryptophan synthase, beta subunit.
    
 0.744
PHMEG_0003360
Uncharacterized protein.
    
  0.684
PHMEG_0002647
Serine/threonine-protein phosphatase.
    
  0.684
PHMEG_000115
PDZ domain-containing protein.
    
  0.684
PHMEG_0004992
HAD hydrolase protein.
    
 0.680
PHMEG_00038
Phosphotransferase.
  
 
 0.659
PHMEG_00010541
Uncharacterized protein.
    
 0.628
PHMEG_00027314
Malate synthase; Belongs to the malate synthase family.
     
 0.621
PHMEG_0006679
ATP synthase F1, delta subunit.
    
 0.619
Your Current Organism:
Phytophthora megakarya
NCBI taxonomy Id: 4795
Other names: ATCC 42100, CBS 238.83, IMI 202077, P. megakarya
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.