Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
PHMEG_00011024 | PHMEG_00024706 | A0A225WDX9 | A0A225VFI0 | Elongator complex protein. | Elongator complex protein 1. | 0.945 |
PHMEG_00011024 | PHMEG_0009502 | A0A225WDX9 | A0A225WHV4 | Elongator complex protein. | DPH-type MB domain-containing protein. | 0.760 |
PHMEG_00011024 | PHMEG_0009904 | A0A225WDX9 | A0A225WF19 | Elongator complex protein. | Elongator complex protein. | 0.919 |
PHMEG_0001295 | PHMEG_00015438 | A0A225X1I8 | A0A225W2U7 | Translation elongation factor aEF-2. | 2-(3-amino-3-carboxypropyl)histidine synthase subunit 2; Required for the first step in the synthesis of diphthamide, a post-translational modification of histidine which occurs in translation elongation factor 2. | 0.876 |
PHMEG_0001295 | PHMEG_00016620 | A0A225X1I8 | A0A225VYU1 | Translation elongation factor aEF-2. | Diphthamide biosynthesis protein 1. | 0.876 |
PHMEG_0001295 | PHMEG_00035212 | A0A225X1I8 | A0A225UPJ4 | Translation elongation factor aEF-2. | Diphthamide biosynthesis protein 1. | 0.876 |
PHMEG_0001295 | PHMEG_0009502 | A0A225X1I8 | A0A225WHV4 | Translation elongation factor aEF-2. | DPH-type MB domain-containing protein. | 0.884 |
PHMEG_00015438 | PHMEG_0001295 | A0A225W2U7 | A0A225X1I8 | 2-(3-amino-3-carboxypropyl)histidine synthase subunit 2; Required for the first step in the synthesis of diphthamide, a post-translational modification of histidine which occurs in translation elongation factor 2. | Translation elongation factor aEF-2. | 0.876 |
PHMEG_00015438 | PHMEG_00019188 | A0A225W2U7 | A0A225VS76 | 2-(3-amino-3-carboxypropyl)histidine synthase subunit 2; Required for the first step in the synthesis of diphthamide, a post-translational modification of histidine which occurs in translation elongation factor 2. | Elongation factor Tu. | 0.855 |
PHMEG_00015438 | PHMEG_0006071 | A0A225W2U7 | A0A225WPL8 | 2-(3-amino-3-carboxypropyl)histidine synthase subunit 2; Required for the first step in the synthesis of diphthamide, a post-translational modification of histidine which occurs in translation elongation factor 2. | Elongation factor G, mitochondrial; Mitochondrial GTPase that catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post-translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome. | 0.855 |
PHMEG_00015438 | PHMEG_0009502 | A0A225W2U7 | A0A225WHV4 | 2-(3-amino-3-carboxypropyl)histidine synthase subunit 2; Required for the first step in the synthesis of diphthamide, a post-translational modification of histidine which occurs in translation elongation factor 2. | DPH-type MB domain-containing protein. | 0.887 |
PHMEG_00016620 | PHMEG_0001295 | A0A225VYU1 | A0A225X1I8 | Diphthamide biosynthesis protein 1. | Translation elongation factor aEF-2. | 0.876 |
PHMEG_00016620 | PHMEG_00019188 | A0A225VYU1 | A0A225VS76 | Diphthamide biosynthesis protein 1. | Elongation factor Tu. | 0.855 |
PHMEG_00016620 | PHMEG_0006071 | A0A225VYU1 | A0A225WPL8 | Diphthamide biosynthesis protein 1. | Elongation factor G, mitochondrial; Mitochondrial GTPase that catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post-translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome. | 0.855 |
PHMEG_00016620 | PHMEG_0009502 | A0A225VYU1 | A0A225WHV4 | Diphthamide biosynthesis protein 1. | DPH-type MB domain-containing protein. | 0.887 |
PHMEG_00019188 | PHMEG_00015438 | A0A225VS76 | A0A225W2U7 | Elongation factor Tu. | 2-(3-amino-3-carboxypropyl)histidine synthase subunit 2; Required for the first step in the synthesis of diphthamide, a post-translational modification of histidine which occurs in translation elongation factor 2. | 0.855 |
PHMEG_00019188 | PHMEG_00016620 | A0A225VS76 | A0A225VYU1 | Elongation factor Tu. | Diphthamide biosynthesis protein 1. | 0.855 |
PHMEG_00019188 | PHMEG_00035212 | A0A225VS76 | A0A225UPJ4 | Elongation factor Tu. | Diphthamide biosynthesis protein 1. | 0.855 |
PHMEG_00019188 | PHMEG_0009502 | A0A225VS76 | A0A225WHV4 | Elongation factor Tu. | DPH-type MB domain-containing protein. | 0.708 |
PHMEG_00024706 | PHMEG_00011024 | A0A225VFI0 | A0A225WDX9 | Elongator complex protein 1. | Elongator complex protein. | 0.945 |
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