Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
PHMEG_00014727 | PHMEG_00017426 | A0A225W326 | A0A225VXE4 | Reverse transcriptase Ty1/copia-type domain-containing protein. | Reverse transcriptase. | 0.455 |
PHMEG_00014727 | PHMEG_00022255 | A0A225W326 | A0A225VJX5 | Reverse transcriptase Ty1/copia-type domain-containing protein. | Integrase, catalytic core protein. | 0.405 |
PHMEG_00014727 | PHMEG_0004224 | A0A225W326 | A0A225WUB5 | Reverse transcriptase Ty1/copia-type domain-containing protein. | Uncharacterized protein. | 0.459 |
PHMEG_00014727 | PHMEG_000553 | A0A225W326 | A0A225X2T8 | Reverse transcriptase Ty1/copia-type domain-containing protein. | Reverse transcriptase Ty1/copia-type domain-containing protein. | 0.471 |
PHMEG_00014727 | PHMEG_0007847 | A0A225W326 | A0A225WMJ0 | Reverse transcriptase Ty1/copia-type domain-containing protein. | DEAD/DEAH box RNA helicase. | 0.656 |
PHMEG_00014727 | PHMEG_0008112 | A0A225W326 | A0A225WJZ8 | Reverse transcriptase Ty1/copia-type domain-containing protein. | Gag-pol Polyprotein. | 0.500 |
PHMEG_00016886 | PHMEG_00022316 | A0A225VXW0 | A0A225VJI2 | Gag-pol Polyprotein. | Integrase, catalytic core protein. | 0.458 |
PHMEG_00016886 | PHMEG_00022928 | A0A225VXW0 | A0A225VHG8 | Gag-pol Polyprotein. | Copia type Polyprotein. | 0.477 |
PHMEG_00016886 | PHMEG_0004224 | A0A225VXW0 | A0A225WUB5 | Gag-pol Polyprotein. | Uncharacterized protein. | 0.480 |
PHMEG_00016886 | PHMEG_000553 | A0A225VXW0 | A0A225X2T8 | Gag-pol Polyprotein. | Reverse transcriptase Ty1/copia-type domain-containing protein. | 0.447 |
PHMEG_00016886 | PHMEG_0007847 | A0A225VXW0 | A0A225WMJ0 | Gag-pol Polyprotein. | DEAD/DEAH box RNA helicase. | 0.656 |
PHMEG_00016886 | PHMEG_0008112 | A0A225VXW0 | A0A225WJZ8 | Gag-pol Polyprotein. | Gag-pol Polyprotein. | 0.500 |
PHMEG_00017426 | PHMEG_00014727 | A0A225VXE4 | A0A225W326 | Reverse transcriptase. | Reverse transcriptase Ty1/copia-type domain-containing protein. | 0.455 |
PHMEG_00017426 | PHMEG_00022928 | A0A225VXE4 | A0A225VHG8 | Reverse transcriptase. | Copia type Polyprotein. | 0.445 |
PHMEG_00017426 | PHMEG_000553 | A0A225VXE4 | A0A225X2T8 | Reverse transcriptase. | Reverse transcriptase Ty1/copia-type domain-containing protein. | 0.441 |
PHMEG_00017426 | PHMEG_0007847 | A0A225VXE4 | A0A225WMJ0 | Reverse transcriptase. | DEAD/DEAH box RNA helicase. | 0.656 |
PHMEG_00017426 | PHMEG_0008112 | A0A225VXE4 | A0A225WJZ8 | Reverse transcriptase. | Gag-pol Polyprotein. | 0.508 |
PHMEG_00022255 | PHMEG_00014727 | A0A225VJX5 | A0A225W326 | Integrase, catalytic core protein. | Reverse transcriptase Ty1/copia-type domain-containing protein. | 0.405 |
PHMEG_00022255 | PHMEG_00022928 | A0A225VJX5 | A0A225VHG8 | Integrase, catalytic core protein. | Copia type Polyprotein. | 0.481 |
PHMEG_00022255 | PHMEG_0004224 | A0A225VJX5 | A0A225WUB5 | Integrase, catalytic core protein. | Uncharacterized protein. | 0.481 |
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