Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
PHMEG_00012477 | PHMEG_0007853 | A0A225WA24 | A0A225WL16 | Proline iminopeptidase. | Pyrroline-5-carboxylate reductase. | 0.898 |
PHMEG_00012478 | PHMEG_0007853 | A0A225WAC4 | A0A225WL16 | TFIIS N-terminal domain-containing protein. | Pyrroline-5-carboxylate reductase. | 0.838 |
PHMEG_0001557 | PHMEG_00024203 | A0A225X1C3 | A0A225VE94 | Aspartate aminotransferase. | Proline dehydrogenase; Converts proline to delta-1-pyrroline-5-carboxylate. | 0.738 |
PHMEG_0001557 | PHMEG_0007853 | A0A225X1C3 | A0A225WL16 | Aspartate aminotransferase. | Pyrroline-5-carboxylate reductase. | 0.672 |
PHMEG_0001557 | PHMEG_0008967 | A0A225X1C3 | A0A225WIQ8 | Aspartate aminotransferase. | Aldehyde dehydrogenase. | 0.930 |
PHMEG_00024203 | PHMEG_0001557 | A0A225VE94 | A0A225X1C3 | Proline dehydrogenase; Converts proline to delta-1-pyrroline-5-carboxylate. | Aspartate aminotransferase. | 0.738 |
PHMEG_00024203 | PHMEG_00031844 | A0A225VE94 | A0A225UXC6 | Proline dehydrogenase; Converts proline to delta-1-pyrroline-5-carboxylate. | Delta-1-pyrroline-5-carboxylate synthase; In the C-terminal section; belongs to the gamma-glutamyl phosphate reductase family. | 0.909 |
PHMEG_00024203 | PHMEG_00032581 | A0A225VE94 | A0A225UW33 | Proline dehydrogenase; Converts proline to delta-1-pyrroline-5-carboxylate. | Delta-1-pyrroline-5-carboxylate synthetase. | 0.909 |
PHMEG_00024203 | PHMEG_0004485 | A0A225VE94 | A0A225WVD5 | Proline dehydrogenase; Converts proline to delta-1-pyrroline-5-carboxylate. | Delta-1-pyrroline-5-carboxylate synthetase. | 0.909 |
PHMEG_00024203 | PHMEG_0007853 | A0A225VE94 | A0A225WL16 | Proline dehydrogenase; Converts proline to delta-1-pyrroline-5-carboxylate. | Pyrroline-5-carboxylate reductase. | 0.939 |
PHMEG_00024203 | PHMEG_0008967 | A0A225VE94 | A0A225WIQ8 | Proline dehydrogenase; Converts proline to delta-1-pyrroline-5-carboxylate. | Aldehyde dehydrogenase. | 0.930 |
PHMEG_00024203 | PHMEG_0009149 | A0A225VE94 | A0A225WIA9 | Proline dehydrogenase; Converts proline to delta-1-pyrroline-5-carboxylate. | Delta-1-pyrroline-5-carboxylate synthetase. | 0.909 |
PHMEG_00024203 | PHMEG_0009650 | A0A225VE94 | A0A225WHE6 | Proline dehydrogenase; Converts proline to delta-1-pyrroline-5-carboxylate. | Delta-1-pyrroline-5-carboxylate synthetase. | 0.909 |
PHMEG_00031844 | PHMEG_00024203 | A0A225UXC6 | A0A225VE94 | Delta-1-pyrroline-5-carboxylate synthase; In the C-terminal section; belongs to the gamma-glutamyl phosphate reductase family. | Proline dehydrogenase; Converts proline to delta-1-pyrroline-5-carboxylate. | 0.909 |
PHMEG_00031844 | PHMEG_00032581 | A0A225UXC6 | A0A225UW33 | Delta-1-pyrroline-5-carboxylate synthase; In the C-terminal section; belongs to the gamma-glutamyl phosphate reductase family. | Delta-1-pyrroline-5-carboxylate synthetase. | 0.971 |
PHMEG_00031844 | PHMEG_0004485 | A0A225UXC6 | A0A225WVD5 | Delta-1-pyrroline-5-carboxylate synthase; In the C-terminal section; belongs to the gamma-glutamyl phosphate reductase family. | Delta-1-pyrroline-5-carboxylate synthetase. | 0.972 |
PHMEG_00031844 | PHMEG_0007853 | A0A225UXC6 | A0A225WL16 | Delta-1-pyrroline-5-carboxylate synthase; In the C-terminal section; belongs to the gamma-glutamyl phosphate reductase family. | Pyrroline-5-carboxylate reductase. | 0.755 |
PHMEG_00031844 | PHMEG_0008967 | A0A225UXC6 | A0A225WIQ8 | Delta-1-pyrroline-5-carboxylate synthase; In the C-terminal section; belongs to the gamma-glutamyl phosphate reductase family. | Aldehyde dehydrogenase. | 0.918 |
PHMEG_00031844 | PHMEG_0009149 | A0A225UXC6 | A0A225WIA9 | Delta-1-pyrroline-5-carboxylate synthase; In the C-terminal section; belongs to the gamma-glutamyl phosphate reductase family. | Delta-1-pyrroline-5-carboxylate synthetase. | 0.972 |
PHMEG_00031844 | PHMEG_0009650 | A0A225UXC6 | A0A225WHE6 | Delta-1-pyrroline-5-carboxylate synthase; In the C-terminal section; belongs to the gamma-glutamyl phosphate reductase family. | Delta-1-pyrroline-5-carboxylate synthetase. | 0.972 |
page 1 of 4