STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PHMEG_0007492Cell 5A endo-1,4-betaglucanase; Belongs to the glycosyl hydrolase 5 (cellulase A) family. (569 aa)    
Predicted Functional Partners:
PHMEG_0001324
Cellulose synthase 3.
  
  
  0.864
PHMEG_00030182
Glycoside hydrolase.
    
  0.833
PHMEG_00030181
Glycoside hydrolase.
    
  0.833
PHMEG_00022283
Lysosomal beta glucosidase.
    
  0.833
PHMEG_00023010
Hydrolase.
    
  0.833
PHMEG_00023128
Glycosyl hydrolase.
    
  0.833
PHMEG_0004366
Glycoside hydrolase.
    
  0.833
PHMEG_000189
Glycosyl hydrolase.
    
  0.820
PHMEG_00034293
Glycosyl hydrolase.
    
  0.670
PHMEG_0005483
Glycosyl hydrolase.
    
  0.670
Your Current Organism:
Phytophthora megakarya
NCBI taxonomy Id: 4795
Other names: ATCC 42100, CBS 238.83, IMI 202077, P. megakarya
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