STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PHMEG_0005890Kinesin-like protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family. (829 aa)    
Predicted Functional Partners:
PHMEG_0006681
Kinesin.
    
 0.836
PHMEG_00040397
Ubiquitin carboxyl-terminal hydrolase.
    
 0.744
PHMEG_00030681
Ubiquitin carboxyl-terminal hydrolase.
    
 0.744
PHMEG_00038235
Alpha-tubulin.
  
 
 
 0.671
PHMEG_000451
Tubulin beta chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain.
  
 
 
 0.664
PHMEG_00012913
Tubulin alpha chain.
  
 
 
 0.646
PHMEG_0001390
Intraflagellar Transport protein 80.
    
 0.613
PHMEG_00011168
Uncharacterized protein.
    
  0.598
PHMEG_0008504
Intraflagellar Transport Protein 122.
    
 0.582
PHMEG_00014953
Kinesin-like protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.
  
 
0.560
Your Current Organism:
Phytophthora megakarya
NCBI taxonomy Id: 4795
Other names: ATCC 42100, CBS 238.83, IMI 202077, P. megakarya
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