Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
PHMEG_00010207 | PHMEG_00011409 | A0A225WEA8 | A0A225WCQ0 | U3 small nucleolar RNA-associated protein 18. | ATP-dependent RNA helicase; Belongs to the DEAD box helicase family. DDX54/DBP10 subfamily. | 0.840 |
PHMEG_00010207 | PHMEG_00017642 | A0A225WEA8 | A0A225VWA8 | U3 small nucleolar RNA-associated protein 18. | tRNA (adenine(58)-N(1))-methyltransferase. | 0.422 |
PHMEG_00010207 | PHMEG_00023117 | A0A225WEA8 | A0A225VHM4 | U3 small nucleolar RNA-associated protein 18. | WD_REPEATS_REGION domain-containing protein. | 0.999 |
PHMEG_00010207 | PHMEG_00026068 | A0A225WEA8 | A0A225VA41 | U3 small nucleolar RNA-associated protein 18. | Glutamate-rich WD repeat-containing protein. | 0.864 |
PHMEG_00010207 | PHMEG_0003107 | A0A225WEA8 | A0A225WYT6 | U3 small nucleolar RNA-associated protein 18. | Nucleolar complex protein. | 0.833 |
PHMEG_00010207 | PHMEG_0004503 | A0A225WEA8 | A0A225WVW7 | U3 small nucleolar RNA-associated protein 18. | Uncharacterized protein. | 0.422 |
PHMEG_00010207 | PHMEG_000456 | A0A225WEA8 | A0A225X415 | U3 small nucleolar RNA-associated protein 18. | Brix domain-containing protein. | 0.832 |
PHMEG_00010207 | PHMEG_0005656 | A0A225WEA8 | A0A225WQW6 | U3 small nucleolar RNA-associated protein 18. | U3 small nucleolar RNA-associated protein. | 0.999 |
PHMEG_00010207 | PHMEG_0006007 | A0A225WEA8 | A0A225WR29 | U3 small nucleolar RNA-associated protein 18. | RNA methyltransferase; Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family. | 0.634 |
PHMEG_00010207 | PHMEG_0008971 | A0A225WEA8 | A0A225WHU8 | U3 small nucleolar RNA-associated protein 18. | U3 small nucleolar RNA-associated protein 6. | 0.999 |
PHMEG_00011409 | PHMEG_00010207 | A0A225WCQ0 | A0A225WEA8 | ATP-dependent RNA helicase; Belongs to the DEAD box helicase family. DDX54/DBP10 subfamily. | U3 small nucleolar RNA-associated protein 18. | 0.840 |
PHMEG_00011409 | PHMEG_00017642 | A0A225WCQ0 | A0A225VWA8 | ATP-dependent RNA helicase; Belongs to the DEAD box helicase family. DDX54/DBP10 subfamily. | tRNA (adenine(58)-N(1))-methyltransferase. | 0.620 |
PHMEG_00011409 | PHMEG_00023117 | A0A225WCQ0 | A0A225VHM4 | ATP-dependent RNA helicase; Belongs to the DEAD box helicase family. DDX54/DBP10 subfamily. | WD_REPEATS_REGION domain-containing protein. | 0.746 |
PHMEG_00011409 | PHMEG_00026068 | A0A225WCQ0 | A0A225VA41 | ATP-dependent RNA helicase; Belongs to the DEAD box helicase family. DDX54/DBP10 subfamily. | Glutamate-rich WD repeat-containing protein. | 0.704 |
PHMEG_00011409 | PHMEG_0003107 | A0A225WCQ0 | A0A225WYT6 | ATP-dependent RNA helicase; Belongs to the DEAD box helicase family. DDX54/DBP10 subfamily. | Nucleolar complex protein. | 0.949 |
PHMEG_00011409 | PHMEG_0004503 | A0A225WCQ0 | A0A225WVW7 | ATP-dependent RNA helicase; Belongs to the DEAD box helicase family. DDX54/DBP10 subfamily. | Uncharacterized protein. | 0.620 |
PHMEG_00011409 | PHMEG_000456 | A0A225WCQ0 | A0A225X415 | ATP-dependent RNA helicase; Belongs to the DEAD box helicase family. DDX54/DBP10 subfamily. | Brix domain-containing protein. | 0.927 |
PHMEG_00011409 | PHMEG_0005656 | A0A225WCQ0 | A0A225WQW6 | ATP-dependent RNA helicase; Belongs to the DEAD box helicase family. DDX54/DBP10 subfamily. | U3 small nucleolar RNA-associated protein. | 0.783 |
PHMEG_00011409 | PHMEG_0006007 | A0A225WCQ0 | A0A225WR29 | ATP-dependent RNA helicase; Belongs to the DEAD box helicase family. DDX54/DBP10 subfamily. | RNA methyltransferase; Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family. | 0.633 |
PHMEG_00011409 | PHMEG_0008971 | A0A225WCQ0 | A0A225WHU8 | ATP-dependent RNA helicase; Belongs to the DEAD box helicase family. DDX54/DBP10 subfamily. | U3 small nucleolar RNA-associated protein 6. | 0.486 |
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