STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PHMEG_0005610ANK_REP_REGION domain-containing protein. (308 aa)    
Predicted Functional Partners:
PHMEG_00032573
Proteasomal ubiquitin receptor ADRM1.
    
 0.807
PHMEG_00019577
Proteasomal ubiquitin receptor ADRM1.
    
 0.807
PHMEG_0008820
Ubiquitin carboxyl-terminal hydrolase.
    
 0.799
PHMEG_00021875
26S protease regulatory protein; Belongs to the AAA ATPase family.
   
 
 0.785
PHMEG_0009497
26S proteasome non-ATPase regulatory protein.
   
 
 0.785
PHMEG_00040581
26S protease regulatory protein; Belongs to the AAA ATPase family.
    
 
 0.778
PHMEG_00040397
Ubiquitin carboxyl-terminal hydrolase.
    
  0.778
PHMEG_00030681
Ubiquitin carboxyl-terminal hydrolase.
    
  0.778
PHMEG_00011390
26S protease regulatory protein; Belongs to the AAA ATPase family.
    
 
 0.778
PHMEG_0001988
26S protease regulatory protein; Belongs to the AAA ATPase family.
    
 
 0.778
Your Current Organism:
Phytophthora megakarya
NCBI taxonomy Id: 4795
Other names: ATCC 42100, CBS 238.83, IMI 202077, P. megakarya
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