STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PHMEG_0005131Elicitin. (120 aa)    
Predicted Functional Partners:
PHMEG_0007847
DEAD/DEAH box RNA helicase.
    
 0.798
PHMEG_0004982
Crossover junction endonuclease.
    
 0.789
PHMEG_00018778
Small nuclear ribonucleoprotein E; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family.
   
 0.776
PHMEG_0005271
DEAD/DEAH box RNA helicase.
    
 0.772
PHMEG_0009423
Small nuclear ribonucleoprotein G.
    
  0.755
PHMEG_00020260
DNA2-like helicase.
    
 0.733
PHMEG_00040004
Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family.
   
  0.729
PHMEG_0008394
DNA polymerase zeta catalytic subunit.
    
 0.727
PHMEG_0006882
DNA polymerase epsilon catalytic subunit; DNA polymerase II participates in chromosomal DNA replication; Belongs to the DNA polymerase type-B family.
    
 0.724
PHMEG_00010962
DNA polymerase.
    
 0.723
Your Current Organism:
Phytophthora megakarya
NCBI taxonomy Id: 4795
Other names: ATCC 42100, CBS 238.83, IMI 202077, P. megakarya
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.