STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PHMEG_0003261Uncharacterized protein. (856 aa)    
Predicted Functional Partners:
PHMEG_0001375
GTP-binding nuclear protein; GTP-binding protein involved in nucleocytoplasmic transport. Required for the import of protein into the nucleus and also for RNA export. Involved in chromatin condensation and control of cell cycle. Belongs to the small GTPase superfamily. Ran family.
    
 0.823
PHMEG_00024258
Uncharacterized protein.
    
  0.607
PHMEG_0009502
DPH-type MB domain-containing protein.
    
 
 0.599
PHMEG_00013504
GTP-binding protein Parf.
    
 
 0.575
PHMEG_000396
GTP-binding protein YPTC1.
    
 
 0.575
PHMEG_0001491
Histone H2A; Belongs to the histone H2A family.
    
  0.569
PHMEG_0001503
Histone H2A; Belongs to the histone H2A family.
    
  0.569
PHMEG_00017893
Ubiquitin-like modifier-activating enzyme ATG7; E1-like activating enzyme involved in the 2 ubiquitin-like systems required for autophagy.
    
  0.545
PHMEG_0004851
Ubiquitin activating enzyme.
    
  0.545
PHMEG_00010925
SUMO ligase.
    
  0.544
Your Current Organism:
Phytophthora megakarya
NCBI taxonomy Id: 4795
Other names: ATCC 42100, CBS 238.83, IMI 202077, P. megakarya
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