STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PHMEG_0003730Lipin. (520 aa)    
Predicted Functional Partners:
PHMEG_00013822
Nuclear LIM factor interactor-interacting protein spore-specific form.
    
 0.816
PHMEG_00010836
CTD small phosphatase.
    
 0.816
PHMEG_0005996
Nuclear LIM factor interactor-interacting protein spore-specific form.
    
 0.816
PHMEG_0005997
Nuclear LIM factor interactor-interacting protein cleavage-specific form.
    
 0.816
PHMEG_00027816
CMGC/CDK/CDC2 protein kinase; Belongs to the protein kinase superfamily.
    
 0.785
PHMEG_00011704
CMGC/CDK/CDC2 protein kinase; Belongs to the cyclin family.
    
 0.785
PHMEG_0004318
Cell division protein kinase.
    
 0.785
PHMEG_0004368
CMGC/CDK/CDC2 protein kinase; Belongs to the protein kinase superfamily.
    
 0.785
PHMEG_00010334
Uncharacterized protein.
    
 0.774
PHMEG_0008824
Mitochondrial import inner membrane translocase subunit TIM50; Essential component of the TIM23 complex, a complex that mediates the translocation of transit peptide-containing proteins across the mitochondrial inner membrane.
    
 0.774
Your Current Organism:
Phytophthora megakarya
NCBI taxonomy Id: 4795
Other names: ATCC 42100, CBS 238.83, IMI 202077, P. megakarya
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