Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
PHMEG_0002449 | PHMEG_00024791 | A0A225X0E5 | A0A225VD79 | Protein SDA1; Required for 60S pre-ribosomal subunits export to the cytoplasm; Belongs to the SDA1 family. | Nucleolar protein 10. | 0.862 |
PHMEG_0002449 | PHMEG_00025589 | A0A225X0E5 | A0A225VBN0 | Protein SDA1; Required for 60S pre-ribosomal subunits export to the cytoplasm; Belongs to the SDA1 family. | Sas10 domain-containing protein. | 0.834 |
PHMEG_0002449 | PHMEG_00026371 | A0A225X0E5 | A0A225VB47 | Protein SDA1; Required for 60S pre-ribosomal subunits export to the cytoplasm; Belongs to the SDA1 family. | Uncharacterized protein. | 0.856 |
PHMEG_0002449 | PHMEG_0002667 | A0A225X0E5 | A0A225X070 | Protein SDA1; Required for 60S pre-ribosomal subunits export to the cytoplasm; Belongs to the SDA1 family. | Nucleolar complex protein 4. | 0.651 |
PHMEG_0002449 | PHMEG_00027828 | A0A225X0E5 | A0A225V802 | Protein SDA1; Required for 60S pre-ribosomal subunits export to the cytoplasm; Belongs to the SDA1 family. | Uncharacterized protein. | 0.853 |
PHMEG_0002449 | PHMEG_0003021 | A0A225X0E5 | A0A225WZ64 | Protein SDA1; Required for 60S pre-ribosomal subunits export to the cytoplasm; Belongs to the SDA1 family. | Uncharacterized protein. | 0.630 |
PHMEG_0002449 | PHMEG_0003326 | A0A225X0E5 | A0A225WWG2 | Protein SDA1; Required for 60S pre-ribosomal subunits export to the cytoplasm; Belongs to the SDA1 family. | RRM domain-containing protein. | 0.660 |
PHMEG_0002449 | PHMEG_00036651 | A0A225X0E5 | A0A225UNW5 | Protein SDA1; Required for 60S pre-ribosomal subunits export to the cytoplasm; Belongs to the SDA1 family. | rRNA adenine N(6)-methyltransferase; Belongs to the class I-like SAM-binding methyltransferase superfamily. rRNA adenine N(6)-methyltransferase family. | 0.691 |
PHMEG_0002449 | PHMEG_000456 | A0A225X0E5 | A0A225X415 | Protein SDA1; Required for 60S pre-ribosomal subunits export to the cytoplasm; Belongs to the SDA1 family. | Brix domain-containing protein. | 0.959 |
PHMEG_0002449 | PHMEG_0007558 | A0A225X0E5 | A0A225WMJ2 | Protein SDA1; Required for 60S pre-ribosomal subunits export to the cytoplasm; Belongs to the SDA1 family. | P21-activated protein kinase-interacting protein. | 0.653 |
PHMEG_00024791 | PHMEG_0002449 | A0A225VD79 | A0A225X0E5 | Nucleolar protein 10. | Protein SDA1; Required for 60S pre-ribosomal subunits export to the cytoplasm; Belongs to the SDA1 family. | 0.862 |
PHMEG_00024791 | PHMEG_00025589 | A0A225VD79 | A0A225VBN0 | Nucleolar protein 10. | Sas10 domain-containing protein. | 0.984 |
PHMEG_00024791 | PHMEG_00026371 | A0A225VD79 | A0A225VB47 | Nucleolar protein 10. | Uncharacterized protein. | 0.843 |
PHMEG_00024791 | PHMEG_0002667 | A0A225VD79 | A0A225X070 | Nucleolar protein 10. | Nucleolar complex protein 4. | 0.995 |
PHMEG_00024791 | PHMEG_00027828 | A0A225VD79 | A0A225V802 | Nucleolar protein 10. | Uncharacterized protein. | 0.997 |
PHMEG_00024791 | PHMEG_0003021 | A0A225VD79 | A0A225WZ64 | Nucleolar protein 10. | Uncharacterized protein. | 0.561 |
PHMEG_00024791 | PHMEG_00036651 | A0A225VD79 | A0A225UNW5 | Nucleolar protein 10. | rRNA adenine N(6)-methyltransferase; Belongs to the class I-like SAM-binding methyltransferase superfamily. rRNA adenine N(6)-methyltransferase family. | 0.637 |
PHMEG_00024791 | PHMEG_000456 | A0A225VD79 | A0A225X415 | Nucleolar protein 10. | Brix domain-containing protein. | 0.798 |
PHMEG_00024791 | PHMEG_0007558 | A0A225VD79 | A0A225WMJ2 | Nucleolar protein 10. | P21-activated protein kinase-interacting protein. | 0.634 |
PHMEG_00025589 | PHMEG_0002449 | A0A225VBN0 | A0A225X0E5 | Sas10 domain-containing protein. | Protein SDA1; Required for 60S pre-ribosomal subunits export to the cytoplasm; Belongs to the SDA1 family. | 0.834 |
page 1 of 5