STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PHMEG_0001774Uncharacterized protein. (1981 aa)    
Predicted Functional Partners:
PHMEG_00010541
Uncharacterized protein.
    
 0.763
PHMEG_00016034
Uncharacterized protein.
    
  0.618
PHMEG_00038611
Uncharacterized protein.
    
  0.547
PHMEG_00021676
Uncharacterized protein.
    
  0.547
PHMEG_00015742
Uncharacterized protein.
    
   0.547
PHMEG_00013472
Mastigoneme.
    
  0.547
PHMEG_00010732
Tenascin.
    
  0.547
PHMEG_0005279
Serine/threonine-protein phosphatase.
    
 
 0.543
PHMEG_0009687
Metalloprotease.
    
 0.531
PHMEG_00033988
ANK_REP_REGION domain-containing protein.
    
  0.492
Your Current Organism:
Phytophthora megakarya
NCBI taxonomy Id: 4795
Other names: ATCC 42100, CBS 238.83, IMI 202077, P. megakarya
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.